WormBase Tree Display for Variation: WBVar02151422

WBVar02151422 Name: Public_name: tm11072
  Sequence_details: SMap: S_parent: Sequence: CHROMOSOME_X
    Flanking_sequences: ttaacaacatgctgcaataatatttgaggt gattgaacagttgaacagagttggctcttgtgataccagagctaaattagatcgaaggtggttcaaattgatatcctcgacgttttcgctgtcaattttctgaagtgaactaggaattaaaagttctacacgtgcgcatcaatgcttacgacttctccatcaactgcgtgatagaacctctctagcaatgaaatgattgtcgactttccacaaccacttggaccaacaagagcaagggtttttcctgggtctactttcagattaacaccattcaatatcatacgatccggccgttgatcataatgaaattgaacattctctccaataatttctcccttttcaatatttttctttccatcactggaactgaatggcatcgtagctggatatgtgaacaaatggaatattaatccagctgcatgaactgcttttttgtaatctgggagatatgcagctgcagatccagccatattagctgtcatggaaagagtct
    Mapping_target: CHROMOSOME_X
    Source_location: 7 CHROMOSOME_X 10844693 10865482 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm11072_external
      tm11072_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 11072
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00168602
      WBGene00197473
      WBGene00201921
      WBGene00196216
      WBGene00004002
      WBGene00004001
      WBGene00202388
      WBGene00201604
      WBGene00003999
      WBGene00202226
    Transcript (11)
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Remark: [C05A9]18722/18723-[T21E8]5302/5303 (20788 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
    Old Mapping_target C05A9 updated based on the VEP analysis pipeline to CHROMOSOME_X.
  Method: NBP_knockout_allele