WormBase Tree Display for Variation: WBVar02151177

WBVar02151177 Name: Public_name: tm10816
  Sequence_details: SMap: S_parent: Sequence: CHROMOSOME_II
    Flanking_sequences: attagtcgaacggcctggcctttcacttat ataccgtaatcttcccagaagttggcaagt
    Mapping_target: CHROMOSOME_II
    Source_location: 7 CHROMOSOME_II 717282 746480 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm10816_external
      tm10816_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 10816
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00015616
      WBGene00020171
      WBGene00305723
      WBGene00021456
      WBGene00015614
      WBGene00004926
      WBGene00015615
    Transcript: Y39F10B.1b.1
      Y39F10B.1a.1
      C08G5.2.1
      C08G5.4c.1
      C08G5.4a.1
      Y39F10B.2
      T02H6.1b.1
      C08G5.4b.1
      T02H6.1c.1
    Pseudogene: C08G5.3a
      C08G5.3b
      C08G5.1
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Remark: [T02H6]38550/38551-[C08G5]11871/11872 (29197 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
    Old Mapping_target T02H6 updated based on the VEP analysis pipeline to CHROMOSOME_II.
  Method: NBP_knockout_allele