WormBase Tree Display for Variation: WBVar02140894

WBVar02140894 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h10709
    Other_name: F38E9.2.1:c.1461C>T
      F38E9.2.2:c.1461C>T
      CE53415:p.Cys487=
    HGVSg: CHROMOSOME_X:g.16465649C>T
  Sequence_details: SMap: S_parent: Sequence: F38E9
    Flanking_sequences: CGAAAGAGCTGAACGAGTGCGCCACGGACAAGAACATCTG CATCATTATTGTGTGAACACTGTTGGTGAGTCGCCGGGGG
    Mapping_target: CHROMOSOME_X
    Source_location: 200 CHROMOSOME_X 16465566 16465566
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023760
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00003555
    Transcript: F38E9.2.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F38E9.2.2:c.1461C>T
        HGVSp: CE53415:p.Cys487=
        cDNA_position: 1929
        CDS_position: 1461
        Protein_position: 487
        Exon_number: 13/24
        Codon_change: tgC/tgT
        Amino_acid_change: C
      F38E9.2.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F38E9.2.1:c.1461C>T
        HGVSp: CE53415:p.Cys487=
        cDNA_position: 1593
        CDS_position: 1461
        Protein_position: 487
        Exon_number: 16/27
        Codon_change: tgC/tgT
        Amino_acid_change: C
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose