WormBase Tree Display for Variation: WBVar02139239
expand all nodes | collapse all nodes | view schema
| WBVar02139239 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h5040 | ||||
| Other_name (16) | ||||||
| HGVSg | CHROMOSOME_X:g.4990725G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | ZC8 | ||
| Flanking_sequences | TACTGACAAACTGCGCCGCGATCTGACCAAAGCCGAAAGC | TTGAGAATGAGCTCCGCAAAACAATCGACATTCAGAGCAA | ||||
| Mapping_target | CHROMOSOME_X | |||||
| Source_location | 200 | CHROMOSOME_X | 4990694 | 4990694 | ||
| Type_of_mutation | Substitution | G | A | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023666 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00022500 | ||||
| WBGene00022501 | ||||||
| Transcript | ZC8.4g.1 (12) | |||||
| ZC8.4a.3 (12) | ||||||
| ZC8.6.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | ZC8.6.1:c.564+2579C>T | |||||
| Intron_number | 6/15 | |||||
| ZC8.4h.1 (12) | ||||||
| ZC8.4a.4 (12) | ||||||
| ZC8.4d.1 (12) | ||||||
| ZC8.4a.2 (12) | ||||||
| ZC8.4e.1 (12) | ||||||
| ZC8.4f.1 (12) | ||||||
| ZC8.4a.1 (12) | ||||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
