WormBase Tree Display for Variation: WBVar02138593
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| WBVar02138593 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h10463 | ||||
| Other_name | CE30935:p.Cys71= | |||||
| F02G3.1b.1:c.132C>T | ||||||
| F02G3.1a.1:c.132C>T | ||||||
| CE30934:p.Cys44= | ||||||
| CE30933:p.Cys44= | ||||||
| F02G3.1a.2:c.132C>T | ||||||
| F02G3.1c.1:c.213C>T | ||||||
| F02G3.1a.3:c.132C>T | ||||||
| HGVSg | CHROMOSOME_X:g.695338C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | F02G3 | ||
| Flanking_sequences | TACAGAACAGAAGGTCCGGTGACAACTTTCTTGTTGTTTG | AAGGTCAAAGACTTTGATGGTGCCGCCAGTGATGCCAAAA | ||||
| Mapping_target | CHROMOSOME_X | |||||
| Source_location | 200 | CHROMOSOME_X | 695338 | 695338 | ||
| Type_of_mutation | Substitution | C | T | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023777 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00017184 | ||||
| Transcript | F02G3.1c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | F02G3.1c.1:c.213C>T | |||||
| HGVSp | CE30935:p.Cys71= | |||||
| cDNA_position | 272 | |||||
| CDS_position | 213 | |||||
| Protein_position | 71 | |||||
| Exon_number | 2/15 | |||||
| Codon_change | tgC/tgT | |||||
| Amino_acid_change | C | |||||
| F02G3.1a.3 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F02G3.1a.3:c.132C>T | |||||
| HGVSp | CE30933:p.Cys44= | |||||
| cDNA_position | 183 | |||||
| CDS_position | 132 | |||||
| Protein_position | 44 | |||||
| Exon_number | 3/16 | |||||
| Codon_change | tgC/tgT | |||||
| Amino_acid_change | C | |||||
| F02G3.1b.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F02G3.1b.1:c.132C>T | |||||
| HGVSp | CE30934:p.Cys44= | |||||
| cDNA_position | 132 | |||||
| CDS_position | 132 | |||||
| Protein_position | 44 | |||||
| Exon_number | 2/14 | |||||
| Codon_change | tgC/tgT | |||||
| Amino_acid_change | C | |||||
| F02G3.1a.2 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F02G3.1a.2:c.132C>T | |||||
| HGVSp | CE30933:p.Cys44= | |||||
| cDNA_position | 183 | |||||
| CDS_position | 132 | |||||
| Protein_position | 44 | |||||
| Exon_number | 3/15 | |||||
| Codon_change | tgC/tgT | |||||
| Amino_acid_change | C | |||||
| F02G3.1a.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F02G3.1a.1:c.132C>T | |||||
| HGVSp | CE30933:p.Cys44= | |||||
| cDNA_position | 1248 | |||||
| CDS_position | 132 | |||||
| Protein_position | 44 | |||||
| Exon_number | 3/16 | |||||
| Codon_change | tgC/tgT | |||||
| Amino_acid_change | C | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
