WormBase Tree Display for Variation: WBVar02138112
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WBVar02138112 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h17661 | ||||
Other_name | Y59A8B.22d.1:c.19-531C>A | |||||
Y59A8B.22a.1:c.1054-531C>A | ||||||
Y59A8B.22b.1:c.763-531C>A | ||||||
Y59A8B.22c.1:c.664-531C>A | ||||||
HGVSg | CHROMOSOME_V:g.17972112G>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||
Flanking_sequences | AAATCTTTTTTGTTTTTTTTTTTTTTTTTGGGATTTTCAG | GAAAATTTCAGATTTTTAATTAGAAAATTGATTTTTTTTT | ||||
Mapping_target | CHROMOSOME_V | |||||
Source_location | 200 | CHROMOSOME_V | 17972080 | 17972080 | ||
Type_of_mutation | Substitution | G | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023704 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00013354 | ||||
Transcript | Y59A8B.22b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y59A8B.22b.1:c.763-531C>A | |||||
Intron_number | 6/8 | |||||
Y59A8B.22d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y59A8B.22d.1:c.19-531C>A | |||||
Intron_number | 1/3 | |||||
Y59A8B.22a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y59A8B.22a.1:c.1054-531C>A | |||||
Intron_number | 8/11 | |||||
Y59A8B.22c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y59A8B.22c.1:c.664-531C>A | |||||
Intron_number | 5/7 | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |