WormBase Tree Display for Variation: WBVar02138106

WBVar02138106 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h15504
    Other_name: Y59A8B.22b.1:c.943-332C>T
      Y59A8B.22a.1:c.1234-332C>T
      Y59A8B.22d.1:c.199-332C>T
      Y59A8B.22c.1:c.844-332C>T
    HGVSg: CHROMOSOME_V:g.17970638G>A
  Sequence_details: SMap: S_parent: Sequence: Y59A8B
    Flanking_sequences: ATCTATTTTTTTTTCCGGCTGTACACTGCAACTTTTTCCTCACGAGGGACGAGGAAAAGTGGTTTCTAGGCCATGGCCGA GGGCCGACAAGTTTCAGCGGCCATTCATCTTGCTTTGTTT
    Mapping_target: CHROMOSOME_V
    Source_location: 200 CHROMOSOME_V 17970606 17970606
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023766
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00013354
    Transcript: Y59A8B.22b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y59A8B.22b.1:c.943-332C>T
        Intron_number: 7/8
      Y59A8B.22d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y59A8B.22d.1:c.199-332C>T
        Intron_number: 2/3
      Y59A8B.22a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y59A8B.22a.1:c.1234-332C>T
        Intron_number: 9/11
      Y59A8B.22c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y59A8B.22c.1:c.844-332C>T
        Intron_number: 6/7
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose