WormBase Tree Display for Variation: WBVar02134673
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WBVar02134673 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h14940 | ||||
Other_name | CE33754:p.Trp1121Ter | |||||
C05C12.3.1:c.3362G>A | ||||||
HGVSg | CHROMOSOME_IV:g.11251809C>T | |||||
Sequence_details | SMap | S_parent | Sequence | C05C12 | ||
Flanking_sequences | CATTATAGTTGATACAACTTTCCGACCTATTTCCAGAGTC | ACACAAAAATATAAGCAAATACATACCATTCCGACCAGCT | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 11251779 | 11251779 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023767 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00001795 | ||||
Transcript | C05C12.3.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | |||||
HGVSc | C05C12.3.1:c.3362G>A | |||||
HGVSp | CE33754:p.Trp1121Ter | |||||
cDNA_position | 3432 | |||||
CDS_position | 3362 | |||||
Protein_position | 1121 | |||||
Exon_number | 23/34 | |||||
Codon_change | tGg/tAg | |||||
Amino_acid_change | W/* | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |