WormBase Tree Display for Variation: WBVar02133012

WBVar02133012 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h8145
    Other_name: Y39E4B.3c.1:c.712-327C>T
      Y39E4B.13.1:c.36+88G>A
      Y39E4B.3b.1:c.712-327C>T
      Y39E4B.3a.1:c.712-327C>T
    HGVSg: CHROMOSOME_III:g.13091294G>A
  Sequence_details: SMap: S_parent: Sequence: Y39E4B
    Flanking_sequences: GCGCCGGGCCGCACCGCCGGCGAACAGCGGATGGCTCTGT CGCCGACGGCGGAGGAAAATGGTTACTGCCGTGGGTGCCG
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 13091175 13091175
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023690
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00004164
      WBGene00012721
    Transcript: Y39E4B.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39E4B.3b.1:c.712-327C>T
        Intron_number: 4/8
      Y39E4B.13.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39E4B.13.1:c.36+88G>A
        Intron_number: 2/4
      Y39E4B.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39E4B.3c.1:c.712-327C>T
        Intron_number: 4/5
      Y39E4B.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39E4B.3a.1:c.712-327C>T
        Intron_number: 3/6
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose