WormBase Tree Display for Variation: WBVar02131386

WBVar02131386 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12430
    Other_name: C09F5.2a.2:c.300-33C>T
      C09F5.2a.1:c.300-33C>T
      C09F5.2b.1:c.288-33C>T
    HGVSg: CHROMOSOME_III:g.653221C>T
  Sequence_details: SMap: S_parent: Sequence: C09F5
    Flanking_sequences: AGGGTACTACTAAGACTTGAAAGAAATTGCATAAAACGCT CTTGTTCAAACATTCAATTCCTATTATTTCAGACACCGCG
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 653218 653218
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023780
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00015648
    Transcript: C09F5.2a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09F5.2a.2:c.300-33C>T
        Intron_number: 4/7
      C09F5.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09F5.2a.1:c.300-33C>T
        Intron_number: 6/9
      C09F5.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09F5.2b.1:c.288-33C>T
        Intron_number: 1/4
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose