WormBase Tree Display for Variation: WBVar02129127

WBVar02129127 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h5231
    Other_name: Y54E5B.1b.4:c.*1607C>T
      Y54E5B.1b.2:c.*1560C>T
      Y54E5B.1b.1:c.*1566C>T
      Y54E5B.1c.1:c.*209C>T
      Y54E5B.1a.1:c.*209C>T
    HGVSg: CHROMOSOME_I:g.14815539C>T
  Sequence_details: SMap: S_parent: Sequence: Y54E5B
    Flanking_sequences: TTCTGAGCCCACACACACACACACAATAACCTTTATAAGG CTTTCTTCCTCTCCTGTCGAGTCAATTTCAAGATCTCTAA
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 14815526 14815526
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023668
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00004889
    Transcript: Y54E5B.1b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5B.1b.1:c.*1566C>T
        cDNA_position: 2373
        Exon_number: 15/15
      Y54E5B.1a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5B.1a.1:c.*209C>T
        cDNA_position: 2360
        Exon_number: 15/15
      Y54E5B.1b.4 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5B.1b.4:c.*1607C>T
        cDNA_position: 2402
        Exon_number: 15/15
      Y54E5B.1c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5B.1c.1:c.*209C>T
        cDNA_position: 2372
        Exon_number: 15/15
      Y54E5B.1b.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E5B.1b.2:c.*1560C>T
        cDNA_position: 2369
        Exon_number: 15/15
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose