WormBase Tree Display for Variation: WBVar02128347
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| WBVar02128347 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h16856 | ||||
| Other_name | ZC434.7b.5:c.249C>T | |||||
| ZC434.7b.3:c.249C>T | ||||||
| ZC434.7b.4:c.249C>T | ||||||
| ZC434.7b.1:c.249C>T | ||||||
| CE41088:p.Ala83= | ||||||
| ZC434.7b.2:c.249C>T | ||||||
| HGVSg | CHROMOSOME_I:g.10346145C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | ZC434 | ||
| Flanking_sequences | GATACAAGAAAACATTGGCAGCTCAAGGAGTGAATATTGC | GATCATAATGCTCTCAATGATTAGATCAATTCGCTCTATT | ||||
| Mapping_target | CHROMOSOME_I | |||||
| Source_location | 200 | CHROMOSOME_I | 10346135 | 10346135 | ||
| Type_of_mutation | Substitution | C | T | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023779 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00013893 | ||||
| Transcript | ZC434.7b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | ZC434.7b.1:c.249C>T | |||||
| HGVSp | CE41088:p.Ala83= | |||||
| cDNA_position | 253 | |||||
| CDS_position | 249 | |||||
| Protein_position | 83 | |||||
| Exon_number | 5/12 | |||||
| Codon_change | gcC/gcT | |||||
| Amino_acid_change | A | |||||
| ZC434.7b.3 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | ZC434.7b.3:c.249C>T | |||||
| HGVSp | CE41088:p.Ala83= | |||||
| cDNA_position | 253 | |||||
| CDS_position | 249 | |||||
| Protein_position | 83 | |||||
| Exon_number | 5/11 | |||||
| Codon_change | gcC/gcT | |||||
| Amino_acid_change | A | |||||
| ZC434.7b.4 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | ZC434.7b.4:c.249C>T | |||||
| HGVSp | CE41088:p.Ala83= | |||||
| cDNA_position | 253 | |||||
| CDS_position | 249 | |||||
| Protein_position | 83 | |||||
| Exon_number | 5/11 | |||||
| Codon_change | gcC/gcT | |||||
| Amino_acid_change | A | |||||
| ZC434.7b.2 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | ZC434.7b.2:c.249C>T | |||||
| HGVSp | CE41088:p.Ala83= | |||||
| cDNA_position | 253 | |||||
| CDS_position | 249 | |||||
| Protein_position | 83 | |||||
| Exon_number | 5/11 | |||||
| Codon_change | gcC/gcT | |||||
| Amino_acid_change | A | |||||
| ZC434.7b.5 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | ZC434.7b.5:c.249C>T | |||||
| HGVSp | CE41088:p.Ala83= | |||||
| cDNA_position | 249 | |||||
| CDS_position | 249 | |||||
| Protein_position | 83 | |||||
| Exon_number | 4/7 | |||||
| Codon_change | gcC/gcT | |||||
| Amino_acid_change | A | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
