WormBase Tree Display for Gene: WBGene00013893
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| WBGene00013893 | SMap | S_parent | Sequence | ZC434 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | coa-6 | Person_evidence | WBPerson117 | |||||
| Sequence_name | ZC434.7 | ||||||||
| Molecular_name | ZC434.7a | ||||||||
| ZC434.7a.1 | |||||||||
| CE06582 | |||||||||
| ZC434.7b | |||||||||
| CE41088 | |||||||||
| ZC434.7b.1 | |||||||||
| ZC434.7b.2 | |||||||||
| ZC434.7b.3 | |||||||||
| ZC434.7b.4 | |||||||||
| ZC434.7b.5 | |||||||||
| Other_name | CELE_ZC434.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | coa-6 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 Sep 2017 13:25:30 | WBPerson2970 | Name_change | CGC_name | coa-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | coa | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00037180 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004729 | ||||||||
| 00004730 | |||||||||
| 00004731 | |||||||||
| 00004732 | |||||||||
| 00120633 | |||||||||
| 00120634 | |||||||||
| 00120635 | |||||||||
| Contained_in_operon | CEOP1596 | ||||||||
| Ortholog | WBGene00040152 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00059842 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00159879 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00180381 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| chrI_pilon.g2021 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| FB:FBgn0029858 | Drosophila melanogaster | From_analysis | EnsEMBL-Compara | ||||||
| Panther | |||||||||
| ZFIN:ZDB-GENE-100618-4 | Danio rerio | From_analysis | EnsEMBL-Compara | ||||||
| Panther | |||||||||
| HGNC:19958 | Homo sapiens | From_analysis | EnsEMBL-Compara | ||||||
| Panther | |||||||||
| MGI:1913382 | Mus musculus | From_analysis | EnsEMBL-Compara | ||||||
| Panther | |||||||||
| RGD:1305089 | Rattus norvegicus | From_analysis | EnsEMBL-Compara | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Predicted to be involved in mitochondrial ATP synthesis coupled electron transport and respiratory chain complex IV assembly. Predicted to be located in mitochondrion. Predicted to be part of respiratory chain complex IV. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 54. Is an ortholog of human PRORP (protein only RNase P catalytic subunit). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070427 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19958) | ||||
| Molecular_info | Corresponding_CDS | ZC434.7a | |||||||
| ZC434.7b | |||||||||
| Corresponding_transcript | ZC434.7a.1 | ||||||||
| ZC434.7b.1 | |||||||||
| ZC434.7b.2 | |||||||||
| ZC434.7b.3 | |||||||||
| ZC434.7b.4 | |||||||||
| ZC434.7b.5 | |||||||||
| Other_sequence | CBC13465_1 | ||||||||
| CJC05978_1 | |||||||||
| CBC13752_1 | |||||||||
| Associated_feature | WBsf656860 | ||||||||
| WBsf218417 | |||||||||
| WBsf218418 | |||||||||
| WBsf218419 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058915 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1022419 | ||||||||
| Expr1036215 | |||||||||
| Expr1162355 | |||||||||
| Expr2008629 | |||||||||
| Expr2026864 | |||||||||
| Drives_construct | WBCnstr00029466 | ||||||||
| Construct_product | WBCnstr00029466 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (85) | |||||||||
| SAGE_tag (16) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | I | Position | 4.92822 | |||||
| Positive | Positive_clone | ZC434 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
