WormBase Tree Display for Variation: WBVar02128324

WBVar02128324 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12342
    Other_name: Y106G6D.5a.1:c.1200G>A
      CE50220:p.Trp309Ter
      Y106G6D.5b.1:c.927G>A
      CE50264:p.Trp400Ter
    HGVSg: CHROMOSOME_I:g.10120585C>T
  Sequence_details: SMap: S_parent: Sequence: Y106G6D
    Flanking_sequences: GAATGAGTTTCTTACAAGATGGTGTGGTTAATACTGGCAC CAAGTCGCAGGTTCCGTACATTGTGCAGCTTCATCAACAA
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 10120574 10120574
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023780
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00014965
    Transcript: Y106G6D.5b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: Y106G6D.5b.1:c.927G>A
        HGVSp: CE50220:p.Trp309Ter
        cDNA_position: 1174
        CDS_position: 927
        Protein_position: 309
        Exon_number: 8/13
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      Y106G6D.5a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: Y106G6D.5a.1:c.1200G>A
        HGVSp: CE50264:p.Trp400Ter
        cDNA_position: 1293
        CDS_position: 1200
        Protein_position: 400
        Exon_number: 7/12
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose