WormBase Tree Display for Variation: WBVar02127884

WBVar02127884 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h13878
    Other_name: F27D4.2a.3:c.-231+5598G>A
      F27D4.2a.2:c.-228+5598G>A
      F27D4.2b.2:c.-228+5598G>A
      F27D4.2b.1:c.-231+5598G>A
    HGVSg: CHROMOSOME_I:g.7712844C>T
  Sequence_details: SMap: S_parent: Sequence: F27D4
    Flanking_sequences: TGTGTCAAGTTTGCCAACCACAATGTTTGGTCGAGTGCCT CTGTGTGTGCGATTGTTGAGTGCTTGTGTGTGTATCAAGA
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 7712839 7712839
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023886
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00009188
    Transcript: F27D4.2a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F27D4.2a.3:c.-231+5598G>A
        Intron_number: 1/5
      F27D4.2a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F27D4.2a.2:c.-228+5598G>A
        Intron_number: 1/5
      F27D4.2b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F27D4.2b.2:c.-228+5598G>A
        Intron_number: 1/5
      F27D4.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F27D4.2b.1:c.-231+5598G>A
        Intron_number: 1/5
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose