WormBase Tree Display for Variation: WBVar02127293
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| WBVar02127293 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h17527 | ||||
| Other_name | C46H11.4c.1:c.300+1260A>T | |||||
| C46H11.4f.2:c.192+1260A>T | ||||||
| C46H11.4e.1:c.339+1260A>T | ||||||
| C46H11.4f.1:c.192+1260A>T | ||||||
| HGVSg | CHROMOSOME_I:g.5032277A>T | |||||
| Sequence_details | SMap | S_parent | Sequence | C46H11 | ||
| Flanking_sequences | TATTAGGCAACGAAAAGCACTCCTTGATATCTTAAAATTCGAAAAGTAGTGAAAAATAGTCCGAAAATATACCTTTTTCT | CTCCAGAGGGGTCTATCTTGAGAGATTTCCAATCGCCAAAATTATATATAATTTCGTCGGCGATCGCCGATCGCCGACCC | ||||
| Mapping_target | CHROMOSOME_I | |||||
| Source_location | 200 | CHROMOSOME_I | 5032277 | 5032277 | ||
| Type_of_mutation | Substitution | A | T | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023704 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00002979 | ||||
| Transcript | C46H11.4f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | C46H11.4f.1:c.192+1260A>T | |||||
| Intron_number | 4/10 | |||||
| C46H11.4c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C46H11.4c.1:c.300+1260A>T | |||||
| Intron_number | 5/11 | |||||
| C46H11.4f.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C46H11.4f.2:c.192+1260A>T | |||||
| Intron_number | 3/9 | |||||
| C46H11.4e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C46H11.4e.1:c.339+1260A>T | |||||
| Intron_number | 4/9 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
