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WormBase Tree Display for Variation: WBVar02111563

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Name Class

WBVar02111563NamePublic_nameWBVar02111563
Other_namecewivar00842146
T12B5.8.2:c.114-572_114-548delinsTTCTGGGACGCGAAGGATATGCTGCTTTTCGAG
T12B5.9:n.520_529-1delinsTTCTGGGACGCGAAGGATATGCTGCTTTTCGAG
T12B5.8.1:c.114-572_114-548delinsTTCTGGGACGCGAAGGATATGCTGCTTTTCGAG
HGVSgCHROMOSOME_III:g.942305_942329delinsCTCGAAAAGCAGCATATCCTTCGCGTCCCAGAA
Sequence_detailsSMapS_parentSequenceT12B5
Flanking_sequencesAGCCGTGATTGTTCTGTCTTGCGGAAGCAAGCAGCACAGCAATCACTTCTTATTATGGAG
Mapping_targetT12B5
Source_location225CHROMOSOME_III942294942318From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionCTCGAAAAGCAGCATATCCTTCGCGTCCCAGAA
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022856From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00023345
WBGene00020455
TranscriptT12B5.8.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT12B5.8.2:c.114-572_114-548delinsTTCTGGGACGCGAAGGATATGCTGCTTTTCGAG
Intron_number2/6
T12B5.8.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT12B5.8.1:c.114-572_114-548delinsTTCTGGGACGCGAAGGATATGCTGCTTTTCGAG
Intron_number2/5
PseudogeneT12B5.9VEP_consequencesplice_acceptor_variant,splice_donor_variant,non_coding_transcript_exon_variant,intron_variant
VEP_impactHIGH
HGVScT12B5.9:n.520_529-1delinsTTCTGGGACGCGAAGGATATGCTGCTTTTCGAG
cDNA_position520-?
Intron_number4/6
Exon_number4/7
MethodWGS_Flibotte