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WormBase Tree Display for Gene: WBGene00020455

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Name Class

WBGene00020455SMapS_parentSequenceT12B5
IdentityVersion2
NameCGC_namefbxa-59Person_evidenceWBPerson655
Sequence_nameT12B5.8
Molecular_nameT12B5.8
T12B5.8.1
CE32934
T12B5.8.2
Other_nameCELE_T12B5.8Accession_evidenceNDBBX284603
Public_namefbxa-59
DB_infoDatabaseAceViewgene3B556
WormQTLgeneWBGene00020455
WormFluxgeneWBGene00020455
NDBlocus_tagCELE_T12B5.8
PanthergeneCAEEL|WormBase=WBGene00020455|UniProtKB=Q9TZ27
familyPTHR23015
NCBIgene188447
RefSeqproteinNM_001384021.1
TREEFAMTREEFAM_IDTF322360
TrEMBLUniProtAccQ9TZ27
UniProt_GCRPUniProtAccQ9TZ27
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
212 Dec 2005 15:18:56WBPerson2970Name_changeCGC_namefbxa-59
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxa
Allele (321)
RNASeq_FPKM (74)
GO_annotation00097413
Ortholog (26)
Paralog (222)
Structured_descriptionConcise_descriptionThis gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.Paper_evidenceWBPaper00012854
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionInvolved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDST12B5.8
Corresponding_CDS_historyT12B5.8:wp91
Corresponding_transcriptT12B5.8.1
T12B5.8.2
Experimental_infoRNAi_resultWBRNAi00018634Inferred_automaticallyRNAi_primary
WBRNAi00018636Inferred_automaticallyRNAi_primary
WBRNAi00007152Inferred_automaticallyRNAi_primary
WBRNAi00053194Inferred_automaticallyRNAi_primary
WBRNAi00035507Inferred_automaticallyRNAi_primary
WBRNAi00023592Inferred_automaticallyRNAi_primary
WBRNAi00053193Inferred_automaticallyRNAi_primary
WBRNAi00006642Inferred_automaticallyRNAi_primary
Expr_patternExpr1156784
Expr2011559
Expr2029797
Drives_constructWBCnstr00025125
Construct_productWBCnstr00025125
Microarray_results (13)
Expression_cluster (219)
Interaction (19)
Map_infoMapIIIPosition-25.0692Error0.004294
PositivePositive_cloneT12B5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00012854
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene