WormBase Tree Display for Variation: WBVar02109781
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WBVar02109781 | Name | Public_name | WBVar02109781 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00840308 | |||||||
F22D3.2f.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | ||||||||
F22D3.2d.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | ||||||||
F22D3.2j.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | ||||||||
F22D3.2g.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | ||||||||
F22D3.2e.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | ||||||||
HGVSg | CHROMOSOME_II:g.6931919_6931933delinsTCCAATTTTTTAATGAT | |||||||
Sequence_details | SMap | S_parent | Sequence | F22D3 | ||||
Flanking_sequences | CTGTAAAAACAGCCTTACAAGTTTTTTTTT | TTTTTTTTTAATTTGCGAAGAAAAATTTTG | ||||||
Mapping_target | F22D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 6931875 | 6931889 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TCCAATTTTTTAATGAT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00017699 | ||||||
Transcript | F22D3.2g.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F22D3.2g.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | |||||||
Intron_number | 7/18 | |||||||
F22D3.2e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F22D3.2e.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | |||||||
Intron_number | 7/18 | |||||||
F22D3.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F22D3.2d.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | |||||||
Intron_number | 7/18 | |||||||
F22D3.2f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F22D3.2f.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | |||||||
Intron_number | 5/10 | |||||||
F22D3.2j.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F22D3.2j.1:c.541+127_541+141delinsTCCAATTTTTTAATGAT | |||||||
Intron_number | 7/18 | |||||||
Method | WGS_Flibotte |