WormBase Tree Display for Variation: WBVar02100170
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WBVar02100170 | Name | Public_name | WBVar02100170 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00830362 | |||||||
CE32934:p.Asp257_Tyr261delinsGluIleTyrLeuAsp | ||||||||
T12B5.8.1:c.771_781delinsGATATATTTAG | ||||||||
T12B5.8.2:c.771_781delinsGATATATTTAG | ||||||||
HGVSg | CHROMOSOME_III:g.941049_941059delinsCTAAATATATC | |||||||
Sequence_details | SMap | S_parent | Sequence | T12B5 | ||||
Flanking_sequences | CAATTTCAATCGGATTTGTCTTTGATTTGT | TCGCAACTTTGAAATGTACTTCTTCTTAAA | ||||||
Mapping_target | T12B5 | |||||||
Source_location | 225 | CHROMOSOME_III | 941038 | 941048 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CTAAATATATC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020455 | ||||||
Transcript | T12B5.8.2 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | T12B5.8.2:c.771_781delinsGATATATTTAG | |||||||
HGVSp | CE32934:p.Asp257_Tyr261delinsGluIleTyrLeuAsp | |||||||
cDNA_position | 789-800 | |||||||
CDS_position | 771-782 | |||||||
Protein_position | 257-261 | |||||||
Exon_number | 4/7 | |||||||
Codon_change | gaTATATCTTTTTAc/gaGATATATTTAGAc | |||||||
Amino_acid_change | DISFY/EIYLD | |||||||
T12B5.8.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | T12B5.8.1:c.771_781delinsGATATATTTAG | |||||||
HGVSp | CE32934:p.Asp257_Tyr261delinsGluIleTyrLeuAsp | |||||||
cDNA_position | 789-800 | |||||||
CDS_position | 771-782 | |||||||
Protein_position | 257-261 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | gaTATATCTTTTTAc/gaGATATATTTAGAc | |||||||
Amino_acid_change | DISFY/EIYLD | |||||||
Method | WGS_Flibotte |