WormBase Tree Display for Variation: WBVar02097243
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| WBVar02097243 | Name | Public_name | WBVar02097243 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00827337 | |||||||
| Y23H5A.5d.3:c.1567-210_1567-143delinsACAAATCGACAAACCGGCAAATTAT | ||||||||
| Y23H5A.5d.2:c.1567-210_1567-143delinsACAAATCGACAAACCGGCAAATTAT | ||||||||
| Y23H5A.5c.1:c.1567-210_1567-143delinsACAAATCGACAAACCGGCAAATTAT | ||||||||
| Y23H5A.5a.1:c.1609-210_1609-143delinsACAAATCGACAAACCGGCAAATTAT | ||||||||
| Y23H5A.5d.1:c.1567-210_1567-143delinsACAAATCGACAAACCGGCAAATTAT | ||||||||
| HGVSg | CHROMOSOME_I:g.2612578_2612645delinsACAAATCGACAAACCGGCAAATTAT | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y23H5A | ||||
| Flanking_sequences | CCGAAAAATTGCCGGAATTGAAAATTTCCG | CGGAATTGAAATTTTCGGCAAACCGGCAAA | ||||||
| Mapping_target | Y23H5A | |||||||
| Source_location | 225 | CHROMOSOME_I | 2612580 | 2612647 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | ACAAATCGACAAACCGGCAAATTAT | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00000832 | ||||||
| Transcript | Y23H5A.5d.3 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y23H5A.5d.3:c.1567-210_1567-143delinsACAAATCGACAAACCGGCAAATTAT | |||||||
| Intron_number | 9/15 | |||||||
| Y23H5A.5d.2 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y23H5A.5d.2:c.1567-210_1567-143delinsACAAATCGACAAACCGGCAAATTAT | |||||||
| Intron_number | 9/14 | |||||||
| Y23H5A.5c.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y23H5A.5c.1:c.1567-210_1567-143delinsACAAATCGACAAACCGGCAAATTAT | |||||||
| Intron_number | 9/10 | |||||||
| Y23H5A.5a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y23H5A.5a.1:c.1609-210_1609-143delinsACAAATCGACAAACCGGCAAATTAT | |||||||
| Intron_number | 8/15 | |||||||
| Y23H5A.5d.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y23H5A.5d.1:c.1567-210_1567-143delinsACAAATCGACAAACCGGCAAATTAT | |||||||
| Intron_number | 9/15 | |||||||
| Method | WGS_Flibotte |
