WormBase Tree Display for Variation: WBVar02076602

WBVar02076602 Name: Public_name: WBVar02076602
    Other_name: cewivar00805915
      F40F12.7.2:c.*6+188_*77delinsCGTTGC
    HGVSg: CHROMOSOME_III:g.9915701_9924666delinsCGTTGC
  Sequence_details: SMap: S_parent: Sequence: CHROMOSOME_III
    Flanking_sequences: ATATATTCTTCGTAGCTATATTAATTAATA TTATTTCAAATTGACTTTTCAGAATTCGGTTGGTGTTTGTTATATATATAATTAAATGTACCTTTCGAAAATTGTAAAAGTGAAAAATGTGAAATGCATATACATTGAAT
    Mapping_target: CHROMOSOME_III
    Source_location: 225 CHROMOSOME_III 9915612 9924578 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Insertion: CGTTGC
      Deletion
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006631 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00009595
      WBGene00009592
      WBGene00009590
      WBGene00305409
      WBGene00305411
      WBGene00010545
      WBGene00014755
      WBGene00305410
    Transcript: F40F12.3.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 1-2/2
        Exon_number: 1-3/3
      F40F12.13
      F40F12.12
      K03H1.10.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-1219
        Intron_number: 2-5/6
        Exon_number: 1-7/7
      F40F12.7.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 762-?
        Exon_number: 8/8
      F40F12.7.2 VEP_consequence: splice_acceptor_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F40F12.7.2:c.*6+188_*77delinsCGTTGC
        cDNA_position: ?-1315
        Intron_number: 7/7
        Exon_number: 8/8
      F40F12.7.3 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1164-?
        Exon_number: 7/7
      K03H1.10.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-1097
        Intron_number: 2-7/7
        Exon_number: 1-8/8
      F40F12.14
    Pseudogene: F40F12.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 1-2/2
        Exon_number: 1-3/3
      F40F12.8 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 1/1
        Exon_number: 1-2/2
  Method: WGS_Flibotte