WormBase Tree Display for Variation: WBVar02052787
expand all nodes | collapse all nodes | view schema
WBVar02052787 | Name | Public_name | WBVar02052787 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00781987 | |||||||
F45E10.1b.1:c.280+1539del | ||||||||
F45E10.1h.1:c.280+1539del | ||||||||
F45E10.1d.1:c.-123+1539del | ||||||||
F45E10.1g.1:c.280+1539del | ||||||||
F45E10.1c.1:c.280+1539del | ||||||||
F45E10.1a.1:c.280+1539del | ||||||||
HGVSg | CHROMOSOME_II:g.11077180del | |||||||
Sequence_details | SMap | S_parent | Sequence | C09H10 | ||||
Flanking_sequences | AACTGCTGCTGACAAACACCTGCTACCAAA | GGGGGGGGGGGGCTCTCGAAATAAGTGCCA | ||||||
Mapping_target | C09H10 | |||||||
Source_location | 225 | CHROMOSOME_II | 11077122 | 11077122 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006788 | ||||||
Transcript | F45E10.1c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45E10.1c.1:c.280+1539del | |||||||
Intron_number | 4/23 | |||||||
F45E10.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45E10.1b.1:c.280+1539del | |||||||
Intron_number | 4/22 | |||||||
F45E10.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45E10.1d.1:c.-123+1539del | |||||||
Intron_number | 1/20 | |||||||
F45E10.1g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45E10.1g.1:c.280+1539del | |||||||
Intron_number | 4/21 | |||||||
F45E10.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45E10.1a.1:c.280+1539del | |||||||
Intron_number | 5/23 | |||||||
F45E10.1h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45E10.1h.1:c.280+1539del | |||||||
Intron_number | 4/21 | |||||||
Method | WGS_Flibotte |