WormBase Tree Display for Variation: WBVar02045436
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WBVar02045436 | Name | Public_name | WBVar02045436 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00774554 | |||||||
Y54E10BR.4b.1:c.240_248del | ||||||||
Y54E10BR.4a.1:c.492_500del | ||||||||
CE27481:p.Glu165_Phe167del | ||||||||
CE54586:p.Glu81_Phe83del | ||||||||
HGVSg | CHROMOSOME_I:g.3018314_3018322del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54E10BR | ||||
Flanking_sequences | TTCTGAAGGCTCGGAGAGCTCTGAGAGCTC | CGATGAGGACGGCTGGATCACGCAGGACAA | ||||||
Mapping_target | Y54E10BR | |||||||
Source_location | 225 | CHROMOSOME_I | 3018316 | 3018324 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021843 | ||||||
Transcript | Y54E10BR.4a.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y54E10BR.4a.1:c.492_500del | |||||||
HGVSp | CE27481:p.Glu165_Phe167del | |||||||
cDNA_position | 495-503 | |||||||
CDS_position | 492-500 | |||||||
Protein_position | 164-167 | |||||||
Exon_number | 3/6 | |||||||
Codon_change | tcCGAGAGCTTc/tcc | |||||||
Amino_acid_change | SESF/S | |||||||
Y54E10BR.4b.1 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | Y54E10BR.4b.1:c.240_248del | |||||||
HGVSp | CE54586:p.Glu81_Phe83del | |||||||
cDNA_position | 240-248 | |||||||
CDS_position | 240-248 | |||||||
Protein_position | 80-83 | |||||||
Exon_number | 1/3 | |||||||
Codon_change | tcCGAGAGCTTc/tcc | |||||||
Amino_acid_change | SESF/S | |||||||
Method | WGS_Flibotte |