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WormBase Tree Display for Variation: WBVar02045436

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Name Class

WBVar02045436NamePublic_nameWBVar02045436
Other_namecewivar00774554
Y54E10BR.4b.1:c.240_248del
Y54E10BR.4a.1:c.492_500del
CE27481:p.Glu165_Phe167del
CE54586:p.Glu81_Phe83del
HGVSgCHROMOSOME_I:g.3018314_3018322del
Sequence_detailsSMapS_parentSequenceY54E10BR
Flanking_sequencesTTCTGAAGGCTCGGAGAGCTCTGAGAGCTCCGATGAGGACGGCTGGATCACGCAGGACAA
Mapping_targetY54E10BR
Source_location225CHROMOSOME_I30183163018324From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021843
TranscriptY54E10BR.4a.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScY54E10BR.4a.1:c.492_500del
HGVSpCE27481:p.Glu165_Phe167del
cDNA_position495-503
CDS_position492-500
Protein_position164-167
Exon_number3/6
Codon_changetcCGAGAGCTTc/tcc
Amino_acid_changeSESF/S
Y54E10BR.4b.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScY54E10BR.4b.1:c.240_248del
HGVSpCE54586:p.Glu81_Phe83del
cDNA_position240-248
CDS_position240-248
Protein_position80-83
Exon_number1/3
Codon_changetcCGAGAGCTTc/tcc
Amino_acid_changeSESF/S
MethodWGS_Flibotte