WormBase Tree Display for Variation: WBVar02018851
expand all nodes | collapse all nodes | view schema
WBVar02018851 | Name | Public_name | WBVar02018851 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00747356 | |||||||
EGAP1.3.1:c.1212-147_1212-105del | ||||||||
HGVSg | CHROMOSOME_III:g.5927485_5927527del | |||||||
Sequence_details | SMap | S_parent | Sequence | EGAP1 | ||||
Flanking_sequences | GTAGTTTCTCAAAATGTATTATGTACCGTC | TAATCTTTCAAAGTATCAAAGTAAATCGGT | ||||||
Mapping_target | EGAP1 | |||||||
Source_location | 225 | CHROMOSOME_III | 5927440 | 5927482 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006987 | ||||||
Transcript | EGAP1.3.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | EGAP1.3.1:c.1212-147_1212-105del | |||||||
Intron_number | 8/9 | |||||||
Method | WGS_Flibotte |