WormBase Tree Display for Variation: WBVar02003808
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WBVar02003808 | Name | Public_name | WBVar02003808 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00731398 | |||||||
CE40157:p.Pro302_Thr304del | ||||||||
Y46C8AL.2.1:c.903_911del | ||||||||
HGVSg | CHROMOSOME_IV:g.3940719_3940727del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y46C8AL | ||||
Flanking_sequences | GAGTAGTTGGAGTAGACTTCATGGTAGTCGGAGTAGTCGGAGTAGTTGGAGTAGACTTCATGGTAGTCGGAGTAGTCGGAGTAGTTGGAGTAGACTTCATGGTAGTCGGAGTAGTCGGAGTAGTTGGTGTAGACTTCATG | GTAGTCGGAGTAGTTGGAGTAGACTTCATGGTAGTCGGAGTAGTCGGAGTAGACTTCATG | ||||||
Mapping_target | Y46C8AL | |||||||
Source_location | 225 | CHROMOSOME_IV | 3940713 | 3940721 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021580 | ||||||
Transcript | Y46C8AL.2.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y46C8AL.2.1:c.903_911del | |||||||
HGVSp | CE40157:p.Pro302_Thr304del | |||||||
cDNA_position | 909-917 | |||||||
CDS_position | 903-911 | |||||||
Protein_position | 301-304 | |||||||
Exon_number | 3/3 | |||||||
Codon_change | acTCCGACTACc/acc | |||||||
Amino_acid_change | TPTT/T | |||||||
Method | WGS_Flibotte |