WormBase Tree Display for Variation: WBVar01998472
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WBVar01998472 | Name | Public_name | WBVar01998472 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00725815 | |||||||
CE26205:p.Ser1480_Ser1481del | ||||||||
Y59A8B.1a.1:c.4437_4442del | ||||||||
HGVSg | CHROMOSOME_V:g.17938373_17938378del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||||
Flanking_sequences | GGATCGGATTTCGCCGATTTTTTCGATTTT | GAAGAAGAAGAACTTGTAGTCGTTGTAGTT | ||||||
Mapping_target | Y59A8B | |||||||
Source_location | 225 | CHROMOSOME_V | 17938347 | 17938352 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001080 | ||||||
Transcript | Y59A8B.1a.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y59A8B.1a.1:c.4437_4442del | |||||||
HGVSp | CE26205:p.Ser1480_Ser1481del | |||||||
cDNA_position | 4602-4607 | |||||||
CDS_position | 4437-4442 | |||||||
Protein_position | 1479-1481 | |||||||
Exon_number | 10/13 | |||||||
Codon_change | tcTTCTTCa/tca | |||||||
Amino_acid_change | SSS/S | |||||||
Method | WGS_Flibotte |