WormBase Tree Display for Variation: WBVar01975301
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WBVar01975301 | Name | Public_name | WBVar01975301 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00701297 | |||||||
T01D3.3b.1:c.68-138_68-137del | ||||||||
T01D3.3c.1:c.68-138_68-137del | ||||||||
T01D3.3a.1:c.-74_-73del | ||||||||
HGVSg | CHROMOSOME_V:g.13705361_13705362del | |||||||
Sequence_details | SMap | S_parent | Sequence | T01D3 | ||||
Flanking_sequences | TTAAAGTTTCGAAAACTGAGAAAAAAGACC | CACTAATGCTAAAATAAGAAAATCAAAAAA | ||||||
Mapping_target | T01D3 | |||||||
Source_location | 225 | CHROMOSOME_V | 13705349 | 13705350 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00011328 | ||||||
Transcript | T01D3.3c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T01D3.3c.1:c.68-138_68-137del | |||||||
Intron_number | 2/9 | |||||||
T01D3.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T01D3.3b.1:c.68-138_68-137del | |||||||
Intron_number | 2/13 | |||||||
T01D3.3a.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T01D3.3a.1:c.-74_-73del | |||||||
cDNA_position | 1091-1092 | |||||||
Exon_number | 1/9 | |||||||
Method | WGS_Flibotte |