WormBase Tree Display for Variation: WBVar01947992
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WBVar01947992 | Name | Public_name | WBVar01947992 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00669637 | |||||||
Y52B11B.1.1:c.240_247del | ||||||||
W02B9.1b.1:c.1211-985_1211-978del | ||||||||
CE19220:p.Asp81AsnfsTer4 | ||||||||
HGVSg | CHROMOSOME_I:g.11124055_11124062del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y52B11B | ||||
Flanking_sequences | CGGTGGACAATCGAAACCAAGTATTGGAGA | TAATTCCATTTGATGATCCAAATTTTGAAT | ||||||
Mapping_target | Y52B11B | |||||||
Source_location | 225 | CHROMOSOME_I | 11124048 | 11124055 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013130 | ||||||
WBGene00001980 | ||||||||
Transcript | W02B9.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | W02B9.1b.1:c.1211-985_1211-978del | |||||||
Intron_number | 7/32 | |||||||
Y52B11B.1.1 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | Y52B11B.1.1:c.240_247del | |||||||
HGVSp | CE19220:p.Asp81AsnfsTer4 | |||||||
cDNA_position | 261-268 | |||||||
CDS_position | 240-247 | |||||||
Protein_position | 80-83 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | gaTGATGTACta/gata | |||||||
Amino_acid_change | DDVL/DX | |||||||
Method | WGS_Flibotte |