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WormBase Tree Display for Variation: WBVar01947992

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Name Class

WBVar01947992NamePublic_nameWBVar01947992
Other_namecewivar00669637
Y52B11B.1.1:c.240_247del
W02B9.1b.1:c.1211-985_1211-978del
CE19220:p.Asp81AsnfsTer4
HGVSgCHROMOSOME_I:g.11124055_11124062del
Sequence_detailsSMapS_parentSequenceY52B11B
Flanking_sequencesCGGTGGACAATCGAAACCAAGTATTGGAGATAATTCCATTTGATGATCCAAATTTTGAAT
Mapping_targetY52B11B
Source_location225CHROMOSOME_I1112404811124055From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00013130
WBGene00001980
TranscriptW02B9.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02B9.1b.1:c.1211-985_1211-978del
Intron_number7/32
Y52B11B.1.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScY52B11B.1.1:c.240_247del
HGVSpCE19220:p.Asp81AsnfsTer4
cDNA_position261-268
CDS_position240-247
Protein_position80-83
Exon_number3/4
Codon_changegaTGATGTACta/gata
Amino_acid_changeDDVL/DX
MethodWGS_Flibotte