WormBase Tree Display for Variation: WBVar01938156
expand all nodes | collapse all nodes | view schema
WBVar01938156 | Name | Public_name | WBVar01938156 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00658716 | |||||||
H19M22.2d.1:c.1615+239del | ||||||||
H19M22.2a.1:c.1615+239del | ||||||||
H19M22.2b.1:c.1615+239del | ||||||||
HGVSg | CHROMOSOME_III:g.2661453del | |||||||
Sequence_details | SMap | S_parent | Sequence | H19M22 | ||||
Flanking_sequences | CAATTTGTCGGCTTGCCGATTTGCCGGAAA | TTTCAATGCCGGCAATTTGTCGGTTTTCCG | ||||||
Mapping_target | H19M22 | |||||||
Source_location | 225 | CHROMOSOME_III | 2661445 | 2661445 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002915 | ||||||
Transcript | H19M22.2a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H19M22.2a.1:c.1615+239del | |||||||
Intron_number | 6/26 | |||||||
H19M22.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H19M22.2d.1:c.1615+239del | |||||||
Intron_number | 5/13 | |||||||
H19M22.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H19M22.2b.1:c.1615+239del | |||||||
Intron_number | 6/28 | |||||||
Method | WGS_Flibotte |