WormBase Tree Display for Variation: WBVar01920088
expand all nodes | collapse all nodes | view schema
WBVar01920088 | Name | Public_name | WBVar01920088 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00638374 | |||||||
Y49E10.19.2:c.*294del | ||||||||
Y49E10.19.1:c.*294del | ||||||||
HGVSg | CHROMOSOME_III:g.12446381del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y49E10 | ||||
Flanking_sequences | CTCACACTTTCACCAAATGTTTATTTTAAC | AAAAAAAAACCGAAAATTAATTGTAAGAGT | ||||||
Mapping_target | Y49E10 | |||||||
Source_location | 225 | CHROMOSOME_III | 12446280 | 12446280 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013038 | ||||||
Transcript | Y49E10.19.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y49E10.19.1:c.*294del | |||||||
cDNA_position | 3792 | |||||||
Exon_number | 10/10 | |||||||
Y49E10.19.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y49E10.19.2:c.*294del | |||||||
cDNA_position | 3917 | |||||||
Exon_number | 11/11 | |||||||
Method | WGS_Flibotte |