WormBase Tree Display for Variation: WBVar01878586
expand all nodes | collapse all nodes | view schema
WBVar01878586 | Name | Public_name | WBVar01878586 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00593059 | |||||||
ZC8.4e.1:c.197-2337A>G | ||||||||
ZC8.4f.1:c.-22+235A>G | ||||||||
ZC8.4a.1:c.-22+235A>G | ||||||||
ZC8.6.1:c.565-2136T>C | ||||||||
ZC8.4a.2:c.-22+235A>G | ||||||||
HGVSg | CHROMOSOME_X:g.4981730A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | ZC8 | ||||
Flanking_sequences | AGGAAAAAACATAATATGTGTTGTTTCGGC | ATTTTCTTGTTCAAATGTTAGTGGGTGGAG | ||||||
Mapping_target | ZC8 | |||||||
Source_location | 225 | CHROMOSOME_X | 4981699 | 4981699 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022500 | ||||||
WBGene00022501 | ||||||||
Transcript | ZC8.4a.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | ZC8.4a.2:c.-22+235A>G | |||||||
Intron_number | 1/20 | |||||||
ZC8.6.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | ZC8.6.1:c.565-2136T>C | |||||||
Intron_number | 6/15 | |||||||
ZC8.4f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | ZC8.4f.1:c.-22+235A>G | |||||||
Intron_number | 1/20 | |||||||
ZC8.4e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | ZC8.4e.1:c.197-2337A>G | |||||||
Intron_number | 1/18 | |||||||
ZC8.4a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | ZC8.4a.1:c.-22+235A>G | |||||||
Intron_number | 2/21 | |||||||
Method | WGS_Flibotte |