WormBase Tree Display for Variation: WBVar01823834
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WBVar01823834 | Name | Public_name | WBVar01823834 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00535673 | |||||||
Y59A8B.22c.1:c.237G>A | ||||||||
Y59A8B.22a.1:c.627G>A | ||||||||
CE45240:p.Lys209= | ||||||||
CE45262:p.Lys112= | ||||||||
Y59A8B.22b.1:c.336G>A | ||||||||
CE45286:p.Lys79= | ||||||||
HGVSg | CHROMOSOME_V:g.17976291C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||||
Flanking_sequences | TAAAAATACTTCATGCATTGCGACAGTCTT | TTGAATTGAGCCAAATAATCTCTGAAAATT | ||||||
Mapping_target | Y59A8B | |||||||
Source_location | 225 | CHROMOSOME_V | 17976264 | 17976264 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013354 | ||||||
Transcript | Y59A8B.22b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y59A8B.22b.1:c.336G>A | |||||||
HGVSp | CE45262:p.Lys112= | |||||||
cDNA_position | 336 | |||||||
CDS_position | 336 | |||||||
Protein_position | 112 | |||||||
Exon_number | 4/9 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
Y59A8B.22a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y59A8B.22a.1:c.627G>A | |||||||
HGVSp | CE45240:p.Lys209= | |||||||
cDNA_position | 628 | |||||||
CDS_position | 627 | |||||||
Protein_position | 209 | |||||||
Exon_number | 6/12 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
Y59A8B.22c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y59A8B.22c.1:c.237G>A | |||||||
HGVSp | CE45286:p.Lys79= | |||||||
cDNA_position | 237 | |||||||
CDS_position | 237 | |||||||
Protein_position | 79 | |||||||
Exon_number | 3/8 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
Method | WGS_Flibotte |