WormBase Tree Display for Variation: WBVar01818993
expand all nodes | collapse all nodes | view schema
WBVar01818993 | Name | Public_name | WBVar01818993 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00530566 | |||||||
F53E2.2.1:c.*245T>A | ||||||||
C38C3.5.1:c.4-565T>A | ||||||||
HGVSg | CHROMOSOME_V:g.1476317T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C38C3 | ||||
Flanking_sequences | GACTGCGGCGATGTGTTTCGATGATGTTTC | TAAGCGTCTTCTTCACATTTTCACCTCTTA | ||||||
Mapping_target | C38C3 | |||||||
Source_location | 225 | CHROMOSOME_V | 1476317 | 1476317 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00302980 | ||||||
WBGene00006794 | ||||||||
Transcript | F53E2.2.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53E2.2.1:c.*245T>A | |||||||
cDNA_position | 796 | |||||||
Exon_number | 7/7 | |||||||
C38C3.5.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C38C3.5.1:c.4-565T>A | |||||||
Intron_number | 2/6 | |||||||
Method | WGS_Flibotte |