WormBase Tree Display for Variation: WBVar01762156
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WBVar01762156 | Name | Public_name | WBVar01762156 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00462021 | |||||||
CE54586:p.Asp30Tyr | ||||||||
CE27481:p.Asp114Tyr | ||||||||
Y54E10BR.4a.1:c.340G>T | ||||||||
Y54E10BR.4b.1:c.88G>T | ||||||||
HGVSg | CHROMOSOME_I:g.3018162G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54E10BR | ||||
Flanking_sequences | GAAAATGACGTTGCTGAGACTACAGAAGAT | ATGAGAAGAAGAATATTGAGGATTTAAGTG | ||||||
Mapping_target | Y54E10BR | |||||||
Source_location | 225 | CHROMOSOME_I | 3018164 | 3018164 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021843 | ||||||
Transcript | Y54E10BR.4a.1 (12) | |||||||
Y54E10BR.4b.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | Y54E10BR.4b.1:c.88G>T | |||||||
HGVSp | CE54586:p.Asp30Tyr | |||||||
cDNA_position | 88 | |||||||
CDS_position | 88 | |||||||
Protein_position | 30 | |||||||
Exon_number | 1/3 | |||||||
Codon_change | Gat/Tat | |||||||
Amino_acid_change | D/Y | |||||||
Method | WGS_Flibotte |