WormBase Tree Display for Variation: WBVar01720448
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WBVar01720448 | Name | Public_name | WBVar01720448 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00418624 | |||||||
C16D2.1a.1:c.-125G>A | ||||||||
T24H10.7b.1:c.*225G>A | ||||||||
T24H10.7f.1:c.*225G>A | ||||||||
T24H10.7c.1:c.*225G>A | ||||||||
T24H10.7d.1:c.*225G>A | ||||||||
T24H10.7a.1:c.*225G>A | ||||||||
T24H10.7e.1:c.*225G>A | ||||||||
HGVSg | CHROMOSOME_II:g.9132090G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C16D2 | ||||
Flanking_sequences | AATATCTCATTTAACAATTATTTTTGAAAA | AAAAACCAAAAATTATTTAATTTTAAAATT | ||||||
Mapping_target | C16D2 | |||||||
Source_location | 225 | CHROMOSOME_II | 9132028 | 9132028 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012005 | ||||||
WBGene00007633 | ||||||||
Transcript | T24H10.7f.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T24H10.7f.1:c.*225G>A | |||||||
cDNA_position | 1159 | |||||||
Exon_number | 9/9 | |||||||
T24H10.7e.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T24H10.7e.1:c.*225G>A | |||||||
cDNA_position | 741 | |||||||
Exon_number | 5/5 | |||||||
T24H10.7c.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T24H10.7c.1:c.*225G>A | |||||||
cDNA_position | 609 | |||||||
Exon_number | 5/5 | |||||||
C16D2.1a.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C16D2.1a.1:c.-125G>A | |||||||
cDNA_position | 428 | |||||||
Exon_number | 1/7 | |||||||
T24H10.7a.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T24H10.7a.1:c.*225G>A | |||||||
cDNA_position | 1319 | |||||||
Exon_number | 10/10 | |||||||
T24H10.7b.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T24H10.7b.1:c.*225G>A | |||||||
cDNA_position | 1184 | |||||||
Exon_number | 10/10 | |||||||
T24H10.7d.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T24H10.7d.1:c.*225G>A | |||||||
cDNA_position | 769 | |||||||
Exon_number | 5/5 | |||||||
Method | WGS_Flibotte |