WormBase Tree Display for Variation: WBVar01691104
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WBVar01691104 | Name | Public_name | WBVar01691104 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00383181 | |||||||
F22E10.3.1:c.2010T>G | ||||||||
F16H9.2a.1:c.-23-39831T>G | ||||||||
F16H9.2b.1:c.35-39831T>G | ||||||||
CE03262:p.Ala670= | ||||||||
HGVSg | CHROMOSOME_X:g.12747134A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F22E10 | ||||
Flanking_sequences | CTCTTCAAACTCTTCAGTAGCTTCTGGATC | GCCTTGAATTGTTGGGCCTTCACTAAATCA | ||||||
Mapping_target | F22E10 | |||||||
Source_location | 225 | CHROMOSOME_X | 12747064 | 12747064 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004008 | ||||||
WBGene00008901 | ||||||||
Transcript | F16H9.2b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.2b.1:c.35-39831T>G | |||||||
Intron_number | 1/3 | |||||||
F16H9.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F16H9.2a.1:c.-23-39831T>G | |||||||
Intron_number | 1/4 | |||||||
F22E10.3.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F22E10.3.1:c.2010T>G | |||||||
HGVSp | CE03262:p.Ala670= | |||||||
cDNA_position | 2035 | |||||||
CDS_position | 2010 | |||||||
Protein_position | 670 | |||||||
Exon_number | 6/10 | |||||||
Codon_change | gcT/gcG | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |