WormBase Tree Display for Variation: WBVar01676828
expand all nodes | collapse all nodes | view schema
WBVar01676828 | Name | Public_name | WBVar01676828 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00367002 | |||||||
Y45G5AM.9b.1:c.357+501A>G | ||||||||
Y45G5AM.1d.1:c.270-187T>C | ||||||||
Y45G5AM.1a.1:c.1095-187T>C | ||||||||
Y45G5AM.9b.2:c.357+501A>G | ||||||||
Y45G5AM.9a.1:c.357+501A>G | ||||||||
HGVSg | CHROMOSOME_V:g.4189515T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y45G5AR | ||||
Flanking_sequences | GTGGTGCCTCCAAAAGTTTTGGCAATTTAT | AAAAAATTGGCAATTTACCAAAATTTTAAG | ||||||
Mapping_target | Y45G5AR | |||||||
Source_location | 225 | CHROMOSOME_V | 4189501 | 4189501 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003704 | ||||||
WBGene00021561 | ||||||||
Transcript | Y45G5AM.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.1a.1:c.1095-187T>C | |||||||
Intron_number | 7/8 | |||||||
Y45G5AM.9b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.9b.2:c.357+501A>G | |||||||
Intron_number | 3/4 | |||||||
Y45G5AM.9b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.9b.1:c.357+501A>G | |||||||
Intron_number | 4/5 | |||||||
Y45G5AM.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.1d.1:c.270-187T>C | |||||||
Intron_number | 3/3 | |||||||
Y45G5AM.9a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.9a.1:c.357+501A>G | |||||||
Intron_number | 3/7 | |||||||
Method | WGS_Flibotte |