WormBase Tree Display for Variation: WBVar01671821
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WBVar01671821 | Name | Public_name | WBVar01671821 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00361832 | |||||||
C49C3.8b.1:c.50+5C>T | ||||||||
C49C3.8a.1:c.206+5C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.17335854C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C49C3 | ||||
Flanking_sequences | CATGCCGATAGAAGCTTGTATTACAGGTAC | AATTTGTTTTATACGGAAGTTTTTAAAGTT | ||||||
Mapping_target | C49C3 | |||||||
Source_location | 225 | CHROMOSOME_IV | 17335817 | 17335817 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008198 | ||||||
Transcript | C49C3.8a.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C49C3.8a.1:c.206+5C>T | |||||||
Intron_number | 3/5 | |||||||
C49C3.8b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C49C3.8b.1:c.50+5C>T | |||||||
Intron_number | 1/2 | |||||||
Method | WGS_Flibotte |