WormBase Tree Display for Variation: WBVar01656272
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WBVar01656272 | Name | Public_name | WBVar01656272 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00343999 | |||||||
C46F11.1a.1:c.1962A>C | ||||||||
CE37957:p.Ile649= | ||||||||
C46F11.1b.1:c.1947A>C | ||||||||
CE30906:p.Ile654= | ||||||||
HGVSg | CHROMOSOME_III:g.3648570A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C46F11 | ||||
Flanking_sequences | TTGAATTTTCAGACACGTCACAGTTGAAAT | TATTTGCTGATAACATTCTTCATGCTACTT | ||||||
Mapping_target | C46F11 | |||||||
Source_location | 225 | CHROMOSOME_III | 3648552 | 3648552 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006822 | ||||||
Transcript | C46F11.1b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C46F11.1b.1:c.1947A>C | |||||||
HGVSp | CE37957:p.Ile649= | |||||||
cDNA_position | 1950 | |||||||
CDS_position | 1947 | |||||||
Protein_position | 649 | |||||||
Exon_number | 16/17 | |||||||
Codon_change | atA/atC | |||||||
Amino_acid_change | I | |||||||
C46F11.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C46F11.1a.1:c.1962A>C | |||||||
HGVSp | CE30906:p.Ile654= | |||||||
cDNA_position | 1962 | |||||||
CDS_position | 1962 | |||||||
Protein_position | 654 | |||||||
Exon_number | 15/17 | |||||||
Codon_change | atA/atC | |||||||
Amino_acid_change | I | |||||||
Method | WGS_Flibotte |