WormBase Tree Display for Variation: WBVar01654444
expand all nodes | collapse all nodes | view schema
WBVar01654444 | Name | Public_name | WBVar01654444 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00341526 | |||||||
Y59A8B.23b.1:c.1105+340T>C | ||||||||
Y59A8B.23c.1:c.*290T>C | ||||||||
Y59A8B.23a.1:c.1576+340T>C | ||||||||
HGVSg | CHROMOSOME_V:g.17955805A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||||
Flanking_sequences | TTTCTATTTTTCAGAACACATGATTCCATT | TTGTCGGAGCAAAAACCTATGTTCGAAAAA | ||||||
Mapping_target | Y59A8B | |||||||
Source_location | 225 | CHROMOSOME_V | 17955779 | 17955779 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013355 | ||||||
Transcript | Y59A8B.23c.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y59A8B.23c.1:c.*290T>C | |||||||
cDNA_position | 2000 | |||||||
Exon_number | 8/8 | |||||||
Y59A8B.23b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y59A8B.23b.1:c.1105+340T>C | |||||||
Intron_number | 4/5 | |||||||
Y59A8B.23a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y59A8B.23a.1:c.1576+340T>C | |||||||
Intron_number | 6/8 | |||||||
Method | WGS_Flibotte |