WormBase Tree Display for Variation: WBVar01650199
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WBVar01650199 | Name | Public_name | WBVar01650199 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00337022 | |||||||
Y45G5AM.9b.1:c.357+147T>A | ||||||||
Y45G5AM.1a.1:c.*5A>T | ||||||||
Y45G5AM.9a.1:c.357+147T>A | ||||||||
Y45G5AM.9b.2:c.357+147T>A | ||||||||
HGVSg | CHROMOSOME_V:g.4189869A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y45G5AR | ||||
Flanking_sequences | CGAGCGTTGTTGCTCACAAATTGTGAAGTG | ATAAATTTAAATTTAATAAATTAATTTCCA | ||||||
Mapping_target | Y45G5AR | |||||||
Source_location | 225 | CHROMOSOME_V | 4189855 | 4189855 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003704 | ||||||
WBGene00021561 | ||||||||
Transcript | Y45G5AM.1a.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.1a.1:c.*5A>T | |||||||
cDNA_position | 1268 | |||||||
Exon_number | 9/9 | |||||||
Y45G5AM.9b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.9b.2:c.357+147T>A | |||||||
Intron_number | 3/4 | |||||||
Y45G5AM.9b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.9b.1:c.357+147T>A | |||||||
Intron_number | 4/5 | |||||||
Y45G5AM.9a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y45G5AM.9a.1:c.357+147T>A | |||||||
Intron_number | 3/7 | |||||||
Method | WGS_Flibotte |