WormBase Tree Display for Variation: WBVar01649620
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WBVar01649620 | Name | Public_name | WBVar01649620 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00336410 | |||||||
F56D6.2.2:c.1119G>T | ||||||||
CE31546:p.Gln373His | ||||||||
F56D6.2.1:c.1119G>T | ||||||||
HGVSg | CHROMOSOME_IV:g.3924000G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F56D6 | ||||
Flanking_sequences | TTCTCCAATGTCCGTGCCACGATATGCTCA | TATTTAATGATGGTGACAGTTCAAAGCCAT | ||||||
Mapping_target | F56D6 | |||||||
Source_location | 225 | CHROMOSOME_IV | 3923994 | 3923994 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018971 | ||||||
Transcript | F56D6.2.2 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.14 | tolerated | ||||||
PolyPhen | 0.038 | benign | ||||||
HGVSc | F56D6.2.2:c.1119G>T | |||||||
HGVSp | CE31546:p.Gln373His | |||||||
cDNA_position | 1149 | |||||||
CDS_position | 1119 | |||||||
Protein_position | 373 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | caG/caT | |||||||
Amino_acid_change | Q/H | |||||||
F56D6.2.1 (12) | ||||||||
Method | WGS_Flibotte |