WormBase Tree Display for Variation: WBVar01643942
expand all nodes | collapse all nodes | view schema
WBVar01643942 | Name | Public_name | WBVar01643942 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00330015 | |||||||
C46F11.1a.1:c.1329G>A | ||||||||
C46F11.1b.1:c.1314G>A | ||||||||
CE30906:p.Gln443= | ||||||||
CE37957:p.Gln438= | ||||||||
HGVSg | CHROMOSOME_III:g.3647063G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C46F11 | ||||
Flanking_sequences | GGCGGAGAGCAATCTTGCTCGGCCACCACA | AAAGTTTATGTAGCAGGTGAGCCTACATAC | ||||||
Mapping_target | C46F11 | |||||||
Source_location | 225 | CHROMOSOME_III | 3647045 | 3647045 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006822 | ||||||
Transcript | C46F11.1b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C46F11.1b.1:c.1314G>A | |||||||
HGVSp | CE37957:p.Gln438= | |||||||
cDNA_position | 1317 | |||||||
CDS_position | 1314 | |||||||
Protein_position | 438 | |||||||
Exon_number | 11/17 | |||||||
Codon_change | caG/caA | |||||||
Amino_acid_change | Q | |||||||
C46F11.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C46F11.1a.1:c.1329G>A | |||||||
HGVSp | CE30906:p.Gln443= | |||||||
cDNA_position | 1329 | |||||||
CDS_position | 1329 | |||||||
Protein_position | 443 | |||||||
Exon_number | 10/17 | |||||||
Codon_change | caG/caA | |||||||
Amino_acid_change | Q | |||||||
Method | WGS_Flibotte |