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WormBase Tree Display for Variation: WBVar01619777

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Name Class

WBVar01619777NamePublic_nameWBVar01619777
Other_namecewivar00299423
F49E2.4b.2:c.84-172A>T
F49E2.4a.2:c.84-172A>T
F49E2.4b.1:c.84-172A>T
F49E2.4a.1:c.84-172A>T
HGVSgCHROMOSOME_X:g.9575103T>A
Sequence_detailsSMapS_parentSequenceF49E2
Flanking_sequencesGATTTCTGGCATTAAATTAGGTCTGGTCTAGAGGAGTAAACAAAAATACATATTAGTTCA
Mapping_targetF49E2
Source_location225CHROMOSOME_X95750469575046From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00009887
TranscriptF49E2.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF49E2.4a.1:c.84-172A>T
Intron_number3/7
F49E2.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF49E2.4b.1:c.84-172A>T
Intron_number3/7
F49E2.4a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF49E2.4a.2:c.84-172A>T
Intron_number2/6
F49E2.4b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF49E2.4b.2:c.84-172A>T
Intron_number2/6
MethodWGS_Flibotte