WormBase Tree Display for Gene: WBGene00009887
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| WBGene00009887 | SMap | S_parent | Sequence | F49E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | glb-17 | Paper_evidence | WBPaper00031066 | |||||
| Person_evidence | WBPerson1540 | ||||||||
| Sequence_name | F49E2.4 | ||||||||
| Molecular_name | F49E2.4a | ||||||||
| F49E2.4a.1 | |||||||||
| CE01012 | |||||||||
| F49E2.4b | |||||||||
| CE44201 | |||||||||
| F49E2.4a.2 | |||||||||
| F49E2.4b.1 | |||||||||
| F49E2.4b.2 | |||||||||
| Other_name | CELE_F49E2.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | glb-17 | ||||||||
| DB_info | Database | AceView | gene | XK192 | |||||
| WormQTL | gene | WBGene00009887 | |||||||
| WormFlux | gene | WBGene00009887 | |||||||
| NDB | locus_tag | CELE_F49E2.4 | |||||||
| NCBI | gene | 186039 | |||||||
| RefSeq | protein | NM_001270149.4 | |||||||
| NM_001270150.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF321698 | |||||||
| TrEMBL | UniProtAcc | D0VWM4 | |||||||
| Q20623 | |||||||||
| UniProt_GCRP | UniProtAcc | D0VWM4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Oct 2007 15:16:42 | WBPerson2970 | Name_change | CGC_name | glb-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (57) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00117448 | ||||||||
| 00117449 | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00011296 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00007741 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008996 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00077763 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | glb-17 encodes a globin with no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00025067 | |||||
| WBPaper00031066 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable heme binding activity and oxygen binding activity. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49E2.4a | |||||||
| F49E2.4b | |||||||||
| Corresponding_transcript | F49E2.4a.1 | ||||||||
| F49E2.4a.2 | |||||||||
| F49E2.4b.1 | |||||||||
| F49E2.4b.2 | |||||||||
| Other_sequence | NBC05011_1 | ||||||||
| Acan_isotig12975 | |||||||||
| Tcir_isotig24085 | |||||||||
| Tcir_isotig32162 | |||||||||
| NB10020 | |||||||||
| Dviv_isotig24816 | |||||||||
| Tcir_isotig27030 | |||||||||
| Associated_feature | WBsf1006477 | ||||||||
| WBsf1023592 | |||||||||
| WBsf237778 | |||||||||
| WBsf237779 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032546 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047863 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015328 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8497 | ||||||||
| Expr1019823 | |||||||||
| Expr1151694 | |||||||||
| Expr2012052 | |||||||||
| Expr2030288 | |||||||||
| Drives_construct | WBCnstr00013326 | ||||||||
| WBCnstr00031842 | |||||||||
| Construct_product | WBCnstr00031842 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction | WBInteraction000032147 | ||||||||
| WBInteraction000179968 | |||||||||
| WBInteraction000200262 | |||||||||
| WBInteraction000245136 | |||||||||
| WBInteraction000327744 | |||||||||
| Map_info | Map | X | Position | 1.42181 | |||||
| Positive | Positive_clone | F49E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031066 | ||||||||
| WBPaper00032254 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
