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WormBase Tree Display for Variation: WBVar01596540

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Name Class

WBVar01596540NamePublic_nameWBVar01596540
Other_namecewivar00260028
Y59A8B.11a.4:c.-26-28G>A
Y59A8B.11a.3:c.-26-28G>A
Y59A8B.11a.2:c.-54G>A
Y59A8B.11a.1:c.-24-30G>A
Y59A8B.11c.1:c.47-28G>A
Y59A8B.11b.1:c.47-28G>A
HGVSgCHROMOSOME_V:g.18083499C>T
Sequence_detailsSMapS_parentSequenceY59A8B
Flanking_sequencesGAGCACGGCCTCTCTCAATTTCATTTATTTCAAAATTCCTTTTTTCTCTCACACTCTCTCACGTGAGATT
Mapping_targetY59A8B
Source_location225CHROMOSOME_V1808347118083471From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (14)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00013348
TranscriptY59A8B.11c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY59A8B.11c.1:c.47-28G>A
Intron_number2/6
Y59A8B.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY59A8B.11a.1:c.-24-30G>A
Intron_number1/5
Y59A8B.11a.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY59A8B.11a.2:c.-54G>A
cDNA_position963
Exon_number1/5
Y59A8B.11a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY59A8B.11a.3:c.-26-28G>A
Intron_number1/5
Y59A8B.11b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY59A8B.11b.1:c.47-28G>A
Intron_number1/3
Y59A8B.11a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY59A8B.11a.4:c.-26-28G>A
Intron_number1/5
MethodWGS_Flibotte