WormBase Tree Display for Variation: WBVar01588388
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WBVar01588388 | Name | Public_name | WBVar01588388 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00234750 | |||||||
CE14345:p.Leu282= | ||||||||
CE14343:p.Leu362= | ||||||||
T28C12.4b.2:c.844T>C | ||||||||
T28C12.4a.1:c.1084T>C | ||||||||
T28C12.4b.1:c.844T>C | ||||||||
T28C12.4a.2:c.1084T>C | ||||||||
HGVSg | CHROMOSOME_V:g.6324911T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | T28C12 | ||||
Flanking_sequences | AGTGTCGACATCTTCAATTTTTTCAATGGA | TGCCCACTTCAAAGTGAGTAATTGAAAAAG | ||||||
Mapping_target | T28C12 | |||||||
Source_location | 225 | CHROMOSOME_V | 6324894 | 6324894 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020891 | ||||||
Transcript | T28C12.4a.2 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T28C12.4a.2:c.1084T>C | |||||||
HGVSp | CE14343:p.Leu362= | |||||||
cDNA_position | 1118 | |||||||
CDS_position | 1084 | |||||||
Protein_position | 362 | |||||||
Exon_number | 7/12 | |||||||
Codon_change | Ttg/Ctg | |||||||
Amino_acid_change | L | |||||||
T28C12.4b.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T28C12.4b.2:c.844T>C | |||||||
HGVSp | CE14345:p.Leu282= | |||||||
cDNA_position | 879 | |||||||
CDS_position | 844 | |||||||
Protein_position | 282 | |||||||
Exon_number | 5/10 | |||||||
Codon_change | Ttg/Ctg | |||||||
Amino_acid_change | L | |||||||
T28C12.4b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T28C12.4b.1:c.844T>C | |||||||
HGVSp | CE14345:p.Leu282= | |||||||
cDNA_position | 1031 | |||||||
CDS_position | 844 | |||||||
Protein_position | 282 | |||||||
Exon_number | 6/11 | |||||||
Codon_change | Ttg/Ctg | |||||||
Amino_acid_change | L | |||||||
T28C12.4a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T28C12.4a.1:c.1084T>C | |||||||
HGVSp | CE14343:p.Leu362= | |||||||
cDNA_position | 1161 | |||||||
CDS_position | 1084 | |||||||
Protein_position | 362 | |||||||
Exon_number | 6/11 | |||||||
Codon_change | Ttg/Ctg | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |