WormBase Tree Display for Variation: WBVar01582846
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WBVar01582846 | Name | Public_name | WBVar01582846 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00216235 | |||||||
CE24064:p.Asp200= | ||||||||
CE50083:p.Asp147= | ||||||||
Y105C5B.15a.1:c.600C>T | ||||||||
Y105C5B.15b.1:c.441C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.15954020C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y105C5B | ||||
Flanking_sequences | TCAGGTTTTCGCCGGTAACCACGAGTCTGA | AGTCACTTCAATCAAATAATCAATCGCTTC | ||||||
Mapping_target | Y105C5B | |||||||
Source_location | 225 | CHROMOSOME_IV | 15953988 | 15953988 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013654 | ||||||
Transcript | Y105C5B.15b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y105C5B.15b.1:c.441C>T | |||||||
HGVSp | CE50083:p.Asp147= | |||||||
cDNA_position | 441 | |||||||
CDS_position | 441 | |||||||
Protein_position | 147 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Y105C5B.15a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y105C5B.15a.1:c.600C>T | |||||||
HGVSp | CE24064:p.Asp200= | |||||||
cDNA_position | 606 | |||||||
CDS_position | 600 | |||||||
Protein_position | 200 | |||||||
Exon_number | 5/7 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Method | WGS_Flibotte |