WormBase Tree Display for Variation: WBVar01582421
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WBVar01582421 | Name | Public_name | WBVar01582421 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00213626 | |||||||
Y57G11C.22a.1:c.101-4159T>C | ||||||||
CE14964:p.Leu8= | ||||||||
Y57G11C.20.1:c.22T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.14843383T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y57G11C | ||||
Flanking_sequences | GCTCTAGTCATGAACGATTTTTATGTAACT | TACCGTCTTCCGTCAAAAATGCTCAATTTG | ||||||
Mapping_target | Y57G11C | |||||||
Source_location | 225 | CHROMOSOME_IV | 14843351 | 14843351 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013315 | ||||||
WBGene00013317 | ||||||||
Transcript | Y57G11C.20.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y57G11C.20.1:c.22T>C | |||||||
HGVSp | CE14964:p.Leu8= | |||||||
cDNA_position | 22 | |||||||
CDS_position | 22 | |||||||
Protein_position | 8 | |||||||
Exon_number | 1/1 | |||||||
Codon_change | Tta/Cta | |||||||
Amino_acid_change | L | |||||||
Y57G11C.22a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y57G11C.22a.1:c.101-4159T>C | |||||||
Intron_number | 2/7 | |||||||
Method | WGS_Flibotte |